Text Mining for Biology and Biomedicine

References

  1. Spiliopoulou, M., et al., "Coupling Information Extraction and Data Mining for Ontology Learning in PARMENIDES," Proc. RIAO2004, Avignon, 2004.

  2. N dellec, C., "Machine Learning for Information Extraction in Genomics State of the Art and Perspectives," Text Mining and Its Applications, S. Sirmakessis, (ed.), Berlin: Springer-Verlag, Studies in Fuzziness and Soft Computing, Vol. 138, 2004, pp. 99 118.

  3. Bunescu, R., et al., "Comparative Experiments on Learning Information Extractors for Proteins and Their Interactions," Artificial Intelligence in Medicine, Vol. 33, 2005, pp. 139 155.

  4. Allen, J., Natural Language Understanding, 2nd ed., Reading, MA: Bradford Books, 1998.

  5. Jurafsky, D., and J. H. Martin, Speech and Language Processing, Prentice-Hall Series in Artificial Intelligence, Upper Saddle River, NJ: Prentice-Hall, 2000.

  6. Hirschman, L., "The Evolution of Evaluation: Lessons from the Message Understanding Conferences," Computer Speech and Language, Vol. 12, 1998, pp. 281 305.

  7. Hobbs, J. R., "The Generic Information Extraction System," Proc. Fifth Message Understanding Conf. (MUC-5), Baltimore, MD: Morgan Kaufmann, 1993, pp. 87 92.

  8. Hobbs, J. R., "Information Extraction from Biomedical Text," Journal of Biomedical Informatics, Vol. 35, No. 4, 2002, pp. 260 264.

  9. Blaschke, C., L. Hirschman, and A. Valencia, "Information Extraction in Molecular Biology," Briefings in Bioinformatics, Vol. 3, No. 2, 2002, pp. 1 12.

  10. Cohen, A. M., and W. R. Hersh, "A Survey of Current Work in Biomedical Text Mining," Briefings in Bioinformatics, Vol. 6, 2005, pp. 57 71.

  11. De Bruijn, B., and J. Martin, "Getting to the (C)ore of Knowledge: Mining Biomedical Literature," International Journal of Medical Informatics,...

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